Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, badm/rrf2 family | SAMN06295900_11295 | Not Available | Positive | 4581643 - 4582149 | 18436.3 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN06295900_11296 | Not Available | Positive | 4582226 - 4584823 | 96405.8 |
| transcriptional regulator, merr family | SAMN06295900_11297 | Not Available | Positive | 4584947 - 4585420 | 17676.2 |
| 4-carboxymuconolactone decarboxylase | SAMN06295900_11298 | Not Available | Positive | 4585360 - 4585800 | 15651.7 |
| multidrug resistance protein, mate family | SAMN06295900_11299 | Not Available | Negative | 4585755 - 4587134 | 48104.0 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN06295900_112100 | Not Available | Negative | 4587142 - 4588896 | 64752.6 |
| lsu ribosomal protein l31p | SAMN06295900_112101 | Not Available | Negative | 4589091 - 4589354 | 9835.63 |
| hypothetical protein | SAMN06295900_112102 | Not Available | Negative | 4589515 - 4590390 | 32900.7 |
| transcription termination factor rho | SAMN06295900_112103 | Not Available | Negative | 4590455 - 4591717 | 47313.6 |
| thioredoxin | SAMN06295900_112104 | Not Available | Negative | 4591907 - 4592233 | 11908.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.