Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small multidrug resistance protein | SAMN06295900_11285 | Not Available | Negative | 4571548 - 4571919 | 13004.4 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN06295900_11286 | Not Available | Negative | 4571963 - 4573696 | 63721.5 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN06295900_11287 | Not Available | Negative | 4573799 - 4574173 | 13697.6 |
| alanine-synthesizing transaminase | SAMN06295900_11288 | Not Available | Positive | 4574544 - 4575782 | 45731.1 |
| homoserine dehydrogenase | SAMN06295900_11289 | Not Available | Positive | 4575867 - 4577192 | 46649.4 |
| l-threonine synthase | SAMN06295900_11290 | Not Available | Positive | 4577233 - 4578684 | 52927.9 |
| molybdopterin molybdotransferase | SAMN06295900_11291 | Not Available | Positive | 4578761 - 4580008 | 43417.2 |
| molybdopterin synthase subunit moad | SAMN06295900_11292 | Not Available | Positive | 4580066 - 4580323 | 9187.0 |
| molybdopterin synthase subunit moae | SAMN06295900_11293 | Not Available | Positive | 4580352 - 4580843 | 17577.0 |
| hemoglobin | SAMN06295900_11294 | Not Available | Negative | 4580871 - 4581434 | 21354.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.