Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11275 | Not Available | Positive | 4560526 - 4561152 | 23319.9 |
| inorganic phosphate transporter, pit family | SAMN06295900_11276 | Not Available | Positive | 4561175 - 4562185 | 35618.1 |
| cell wall-associated hydrolase, nlpc family | SAMN06295900_11277 | Not Available | Negative | 4562371 - 4563363 | 34738.8 |
| phoh-like atpase | SAMN06295900_11278 | Not Available | Negative | 4563705 - 4565504 | 65609.5 |
| peroxiredoxin q/bcp | SAMN06295900_11279 | Not Available | Negative | 4565848 - 4566312 | 16972.6 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06295900_11280 | Not Available | Negative | 4566400 - 4567296 | 33229.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN06295900_11281 | Not Available | Negative | 4567308 - 4568378 | 40054.9 |
| methionyl-trna formyltransferase | SAMN06295900_11282 | Not Available | Negative | 4568375 - 4569322 | 34051.8 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN06295900_11283 | Not Available | Negative | 4569319 - 4570350 | 38434.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN06295900_11284 | Not Available | Negative | 4570357 - 4571511 | 42231.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.