Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN06295900_11265 | Not Available | Negative | 4550637 - 4551833 | 44425.3 |
| rubredoxin | SAMN06295900_11266 | Not Available | Negative | 4551882 - 4552067 | 7074.33 |
| p-aminobenzoate n-oxygenase aurf | SAMN06295900_11267 | Not Available | Negative | 4552083 - 4552946 | 33788.0 |
| serine aminopeptidase, s33 | SAMN06295900_11268 | Not Available | Negative | 4552958 - 4553923 | 33725.7 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN06295900_11269 | Not Available | Negative | 4553949 - 4555049 | 42493.1 |
| acyl carrier protein | SAMN06295900_11270 | Not Available | Negative | 4555076 - 4555399 | 11853.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN06295900_11271 | Not Available | Negative | 4555440 - 4556432 | 37036.8 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN06295900_11272 | Not Available | Negative | 4556449 - 4557378 | 34191.3 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295900_11273 | Not Available | Negative | 4557394 - 4559232 | 65481.3 |
| hypothetical protein | SAMN06295900_11274 | Not Available | Negative | 4559654 - 4559809 | 5517.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.