Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restart primosome assembly protein prib | SAMN06295900_11255 | Not Available | Positive | 4540940 - 4541239 | 10700.1 |
| ssu ribosomal protein s18p | SAMN06295900_11256 | Not Available | Positive | 4541242 - 4541517 | 10646.0 |
| lsu ribosomal protein l9p | SAMN06295900_11257 | Not Available | Positive | 4541545 - 4541997 | 16044.5 |
| primary replicative dna helicase | SAMN06295900_11258 | Not Available | Positive | 4542126 - 4543514 | 50807.6 |
| acetyl-coa c-acetyltransferase | SAMN06295900_11259 | Not Available | Negative | 4543598 - 4544782 | 41134.9 |
| transcriptional regulator, tetr family | SAMN06295900_11260 | Not Available | Negative | 4544996 - 4545568 | 20336.3 |
| transcriptional regulator, marr family | SAMN06295900_11261 | Not Available | Negative | 4545625 - 4546059 | 15955.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295900_11262 | Not Available | Negative | 4546134 - 4547630 | 52846.4 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN06295900_11263 | Not Available | Negative | 4547642 - 4549234 | 57025.1 |
| membrane fusion protein, multidrug efflux system | SAMN06295900_11264 | Not Available | Negative | 4549231 - 4550313 | 38748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.