Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transport system permease protein | SAMN06295900_11245 | Not Available | Positive | 4530206 - 4531102 | 31722.3 |
| sulfate transport system permease protein | SAMN06295900_11246 | Not Available | Positive | 4531099 - 4532043 | 33266.1 |
| sulfate transport system atp-binding protein | SAMN06295900_11247 | Not Available | Positive | 4532054 - 4533127 | 38717.5 |
| transcriptional regulator, lysr family | SAMN06295900_11248 | Not Available | Positive | 4533174 - 4534100 | 34517.5 |
| l-asparaginase | SAMN06295900_11249 | Not Available | Positive | 4534175 - 4535224 | 35533.5 |
| 2-hydroxy-3-oxopropionate reductase | SAMN06295900_11250 | Not Available | Negative | 4535636 - 4536544 | 31613.2 |
| hydroxypyruvate isomerase | SAMN06295900_11251 | Not Available | Negative | 4536604 - 4537386 | 28665.4 |
| tartronate-semialdehyde synthase | SAMN06295900_11252 | Not Available | Negative | 4537429 - 4539204 | 64064.3 |
| transcriptional regulator, lysr family | SAMN06295900_11253 | Not Available | Positive | 4539361 - 4540272 | 33591.3 |
| ssu ribosomal protein s6p | SAMN06295900_11254 | Not Available | Positive | 4540505 - 4540879 | 14326.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.