Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransacetylase | SAMN06295900_11235 | Not Available | Negative | 4521172 - 4522152 | 33916.3 |
| prc-barrel domain-containing protein | SAMN06295900_11236 | Not Available | Positive | 4522411 - 4523397 | 34370.8 |
| sugar phosphate permease | SAMN06295900_11237 | Not Available | Positive | 4523406 - 4524620 | 41646.3 |
| lipooligosaccharide transport system permease protein | SAMN06295900_11238 | Not Available | Negative | 4524632 - 4525423 | 28289.7 |
| nodulation factor export abc transporter atp-binding protein nodi | SAMN06295900_11239 | Not Available | Negative | 4525500 - 4526414 | 33542.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN06295900_11240 | Not Available | Positive | 4526610 - 4527107 | 17813.3 |
| protein of unknown function | SAMN06295900_11241 | Not Available | Negative | 4527124 - 4527792 | 24031.6 |
| hypothetical protein | SAMN06295900_11242 | Not Available | Negative | 4527865 - 4528209 | 12265.0 |
| sos-response transcriptional repressor, lexa | SAMN06295900_11243 | Not Available | Negative | 4528226 - 4528873 | 23271.1 |
| sulfate transport system substrate-binding protein | SAMN06295900_11244 | Not Available | Positive | 4529068 - 4530108 | 37670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.