Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMN06295900_11225 | Not Available | Negative | 4514447 - 4515847 | 49463.1 |
| Trna-met | Not Available | Not Available | Positive | 4516056 - 4516132 | Not Available |
| uncharacterized protein, upf0303 family | SAMN06295900_11227 | Not Available | Positive | 4516359 - 4516856 | 17742.2 |
| enoyl-coa hydratase/carnithine racemase | SAMN06295900_11228 | Not Available | Positive | 4516979 - 4518124 | 41871.7 |
| hypothetical protein | SAMN06295900_11229 | Not Available | Negative | 4518164 - 4518595 | 15430.2 |
| hypothetical protein | SAMN06295900_11230 | Not Available | Positive | 4518750 - 4518947 | 6703.99 |
| hypothetical protein | SAMN06295900_11231 | Not Available | Positive | 4518993 - 4519235 | 8962.75 |
| hypothetical protein | SAMN06295900_11232 | Not Available | Negative | 4519271 - 4519693 | 15411.2 |
| Trna-his | Not Available | Not Available | Positive | 4519920 - 4519995 | Not Available |
| pp_04003 | SAMN06295900_11234 | Not Available | Negative | 4520085 - 4521035 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.