Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11215 | Not Available | Positive | 4506151 - 4506387 | 8399.99 |
| transcriptional regulator, crp/fnr family | SAMN06295900_11216 | Not Available | Negative | 4506435 - 4507169 | 27192.3 |
| transcriptional regulator, gntr family | SAMN06295900_11217 | Not Available | Positive | 4508233 - 4508970 | 27139.8 |
| amino acid abc transporter membrane protein, paat family | SAMN06295900_11218 | Not Available | Negative | 4509084 - 4509743 | 23920.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_11219 | Not Available | Negative | 4509893 - 4510696 | 28527.7 |
| dihydroorotate oxidase a | SAMN06295900_11220 | Not Available | Negative | 4510794 - 4511828 | 36322.0 |
| arginine-trna-protein transferase | SAMN06295900_11221 | Not Available | Negative | 4511917 - 4512744 | 31198.7 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN06295900_11222 | Not Available | Negative | 4512798 - 4513553 | 27719.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN06295900_11223 | Not Available | Negative | 4513573 - 4514118 | 20601.5 |
| hypothetical protein | SAMN06295900_11224 | Not Available | Negative | 4514304 - 4514435 | 4924.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.