Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii | SAMN06295900_111175 | Not Available | Negative | 4478461 - 4479081 | 22251.5 |
| hypothetical protein | SAMN06295900_111176 | Not Available | Negative | 4479285 - 4479968 | 25628.5 |
| hypothetical protein | SAMN06295900_111177 | Not Available | Negative | 4480003 - 4481499 | 55532.4 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_111178 | Not Available | Negative | 4481885 - 4482169 | 9702.58 |
| sel1 repeat-containing protein | SAMN06295900_111179 | Not Available | Negative | 4482208 - 4483875 | 61425.1 |
| putative transposase | SAMN06295900_111180 | Not Available | Negative | 4484176 - 4484971 | 30319.1 |
| hypothetical protein | SAMN06295900_1121 | Not Available | Positive | 4485362 - 4485616 | 9573.35 |
| hypothetical protein | SAMN06295900_1122 | Not Available | Positive | 4485604 - 4486026 | 15423.5 |
| Trna-leu | Not Available | Not Available | Positive | 4486339 - 4486425 | Not Available |
| rnase r | SAMN06295900_1124 | Not Available | Positive | 4486605 - 4489124 | 93610.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.