Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_111155 | Not Available | Positive | 4455256 - 4457259 | 71383.4 |
| hypothetical protein | SAMN06295900_111156 | Not Available | Positive | 4457388 - 4459106 | 62469.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_111157 | Not Available | Positive | 4459311 - 4460300 | 34912.0 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN06295900_111158 | Not Available | Positive | 4460526 - 4461641 | 42461.7 |
| transcriptional regulator, arac family | SAMN06295900_111159 | Not Available | Positive | 4461699 - 4462565 | 32100.1 |
| hypothetical protein | SAMN06295900_111160 | Not Available | Negative | 4462619 - 4463056 | 14658.8 |
| outer membrane protein ompu | SAMN06295900_111161 | Not Available | Negative | 4463189 - 4464331 | 40395.3 |
| glycine betaine/proline transport system substrate-binding protein | SAMN06295900_111162 | Not Available | Negative | 4464382 - 4465395 | 36280.6 |
| choline-sulfatase | SAMN06295900_111163 | Not Available | Negative | 4465443 - 4466984 | 57726.1 |
| transcriptional regulator, lysr family | SAMN06295900_111164 | Not Available | Positive | 4467099 - 4468031 | 33626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.