Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase | SAMN06295900_111145 | Not Available | Positive | 4444582 - 4445532 | 33240.3 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN06295900_111146 | Not Available | Positive | 4445529 - 4445921 | 14439.3 |
| acyl dehydratase | SAMN06295900_111147 | Not Available | Positive | 4445924 - 4446382 | 17170.4 |
| formyl-coa transferase | SAMN06295900_111148 | Not Available | Positive | 4446382 - 4447602 | 44164.9 |
| shikimate dehydrogenase | SAMN06295900_111149 | Not Available | Positive | 4447599 - 4448435 | 29048.0 |
| 3-dehydroquinate dehydratase | SAMN06295900_111150 | Not Available | Positive | 4448455 - 4448895 | 16309.7 |
| hypothetical protein | SAMN06295900_111151 | Not Available | Positive | 4449491 - 4451554 | 74165.4 |
| glutathione s-transferase | SAMN06295900_111152 | Not Available | Negative | 4451858 - 4452562 | 25953.5 |
| transcriptional regulator, tetr family | SAMN06295900_111153 | Not Available | Positive | 4452678 - 4453253 | 20516.3 |
| pectin lyase | SAMN06295900_111154 | Not Available | Negative | 4453464 - 4454864 | 48541.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.