Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN06295900_111135 | Not Available | Positive | 4433443 - 4434945 | 54670.9 |
| membrane protein | SAMN06295900_111136 | Not Available | Negative | 4434987 - 4435877 | 31181.4 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN06295900_111137 | Not Available | Negative | 4436063 - 4437766 | 61238.6 |
| luciferase family oxidoreductase, group 1 | SAMN06295900_111138 | Not Available | Positive | 4438084 - 4439094 | 35803.8 |
| gst-like protein | SAMN06295900_111139 | Not Available | Positive | 4439201 - 4439905 | 26601.1 |
| dj-1/pfpi family protein | SAMN06295900_111140 | Not Available | Positive | 4440137 - 4441138 | 35376.3 |
| ketosteroid isomerase homolog | SAMN06295900_111141 | Not Available | Positive | 4441277 - 4441759 | 17587.6 |
| transcriptional regulator, arac family /transcriptional regulator, arac family with amidase-like domain | SAMN06295900_111142 | Not Available | Negative | 4441815 - 4442762 | 34289.3 |
| hth-type transcriptional regulator / antitoxin higa | SAMN06295900_111143 | Not Available | Negative | 4442985 - 4443347 | 13167.0 |
| transcriptional regulator, lysr family | SAMN06295900_111144 | Not Available | Negative | 4443529 - 4444476 | 35320.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.