Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | SAMN06295900_111115 | Not Available | Positive | 4408097 - 4408513 | 14304.0 |
| nudix domain-containing protein | SAMN06295900_111116 | Not Available | Positive | 4408604 - 4409080 | 17751.4 |
| dienelactone hydrolase | SAMN06295900_111117 | Not Available | Negative | 4409091 - 4410554 | 52348.1 |
| nicotinamidase-related amidase | SAMN06295900_111118 | Not Available | Negative | 4410705 - 4411277 | 20794.5 |
| tellurite resistance protein teha | SAMN06295900_111119 | Not Available | Positive | 4411402 - 4412457 | 38812.6 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN06295900_111120 | Not Available | Negative | 4412497 - 4413882 | 49840.0 |
| mfs transporter, mhs family, citrate/tricarballylate:h+ symporter | SAMN06295900_111121 | Not Available | Positive | 4414139 - 4415437 | 46077.2 |
| molybdate transport system substrate-binding protein | SAMN06295900_111122 | Not Available | Positive | 4415487 - 4416266 | 27310.9 |
| na+/h+-dicarboxylate symporter | SAMN06295900_111123 | Not Available | Negative | 4416272 - 4417573 | 45394.3 |
| transcriptional regulator, lysr family | SAMN06295900_111124 | Not Available | Negative | 4417570 - 4418502 | 34064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.