Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate transport system regulatory protein | SAMN06295900_111105 | Not Available | Positive | 4395702 - 4396025 | 11380.8 |
| hypothetical protein | SAMN06295900_111106 | Not Available | Negative | 4396086 - 4396625 | 19545.4 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_111107 | Not Available | Negative | 4396907 - 4398148 | 43225.8 |
| transcriptional regulator, marr family | SAMN06295900_111108 | Not Available | Negative | 4398297 - 4398866 | 20164.5 |
| trans-feruloyl-coa synthase | SAMN06295900_111109 | Not Available | Negative | 4398973 - 4400865 | 68040.4 |
| vanillin dehydrogenase | SAMN06295900_111110 | Not Available | Negative | 4400990 - 4402444 | 50621.0 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN06295900_111111 | Not Available | Negative | 4402534 - 4403370 | 31045.3 |
| mfs transporter, aahs family, 3-hydroxyphenylpropionic acid transporter | SAMN06295900_111112 | Not Available | Positive | 4403826 - 4405034 | 41090.7 |
| outer membrane protein (porin) | SAMN06295900_111113 | Not Available | Positive | 4405078 - 4406223 | 39891.0 |
| feruloyl esterase | SAMN06295900_111114 | Not Available | Positive | 4406242 - 4407948 | 58578.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.