Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11195 | Not Available | Positive | 4379428 - 4379991 | 19209.6 |
| hypothetical protein | SAMN06295900_11196 | Not Available | Positive | 4379988 - 4380515 | 18260.0 |
| hypothetical protein | SAMN06295900_11197 | Not Available | Negative | 4380553 - 4380771 | 7696.99 |
| transcriptional regulator, arac family | SAMN06295900_11198 | Not Available | Negative | 4380928 - 4381728 | 29184.1 |
| nadph:quinone reductase | SAMN06295900_11199 | Not Available | Positive | 4381881 - 4382834 | 32760.1 |
| penicillin-binding protein 1c | SAMN06295900_111100 | Not Available | Negative | 4382941 - 4385295 | 84000.6 |
| hypothetical protein | SAMN06295900_111101 | Not Available | Negative | 4385306 - 4391356 | 216628.0 |
| polysaccharide pyruvyl transferase family protein wcak | SAMN06295900_111102 | Not Available | Positive | 4391681 - 4392895 | 43891.7 |
| fmn reductase | SAMN06295900_111103 | Not Available | Negative | 4393008 - 4393586 | 20755.2 |
| drug resistance transporter, emrb/qaca subfamily | SAMN06295900_111104 | Not Available | Positive | 4394020 - 4395582 | 54895.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.