Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclohexyl-isocyanide hydratase | SAMN06295900_11185 | Not Available | Negative | 4370623 - 4371321 | 24375.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN06295900_11186 | Not Available | Positive | 4371466 - 4372440 | 35729.2 |
| lipid-binding sylf domain-containing protein | SAMN06295900_11187 | Not Available | Negative | 4372549 - 4373139 | 19973.8 |
| hypothetical protein | SAMN06295900_11188 | Not Available | Positive | 4373233 - 4373394 | 5834.18 |
| high affinity sulphate transporter 1 | SAMN06295900_11189 | Not Available | Positive | 4373984 - 4375756 | 62537.8 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN06295900_11190 | Not Available | Positive | 4375870 - 4376544 | 24778.6 |
| hypothetical protein | SAMN06295900_11191 | Not Available | Positive | 4376635 - 4377009 | 13394.9 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_11192 | Not Available | Positive | 4377294 - 4378211 | 33359.0 |
| hypothetical protein | SAMN06295900_11193 | Not Available | Negative | 4378333 - 4378548 | 8070.67 |
| hypothetical protein | SAMN06295900_11194 | Not Available | Negative | 4378613 - 4378912 | 11150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.