Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11165 | Not Available | Positive | 4347341 - 4348741 | 50100.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06295900_11166 | Not Available | Negative | 4348735 - 4349424 | 25688.3 |
| coproporphyrinogen iii oxidase, anaerobic | SAMN06295900_11167 | Not Available | Negative | 4349433 - 4350878 | 54265.4 |
| transcriptional regulator, badm/rrf2 family | SAMN06295900_11168 | Not Available | Positive | 4351084 - 4351563 | 17381.4 |
| transcriptional regulator, gntr family | SAMN06295900_11169 | Not Available | Negative | 4351681 - 4352430 | 27388.9 |
| l-lactate dehydrogenase complex protein llde | SAMN06295900_11170 | Not Available | Positive | 4352572 - 4353450 | 31737.4 |
| l-lactate dehydrogenase complex protein lldg | SAMN06295900_11171 | Not Available | Positive | 4353447 - 4354163 | 25318.3 |
| l-lactate dehydrogenase complex protein lldf | SAMN06295900_11172 | Not Available | Positive | 4354160 - 4355605 | 53379.0 |
| lactate permease | SAMN06295900_11173 | Not Available | Positive | 4355721 - 4357433 | 59511.9 |
| molybdopterin biosynthesis enzyme | SAMN06295900_11174 | Not Available | Positive | 4358494 - 4359765 | 45851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.