Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf2249 family | SAMN06295900_11155 | Not Available | Positive | 4339057 - 4339386 | 11295.2 |
| hypothetical protein | SAMN06295900_11156 | Not Available | Negative | 4339709 - 4340710 | 36654.8 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN06295900_11157 | Not Available | Positive | 4341048 - 4342835 | 67432.9 |
| anaerobic ribonucleoside-triphosphate reductase | SAMN06295900_11158 | Not Available | Positive | 4342839 - 4343066 | 8408.93 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMN06295900_11159 | Not Available | Positive | 4343056 - 4343802 | 27389.1 |
| uncharacterized protein, contains metal-binding dgc domain | SAMN06295900_11160 | Not Available | Negative | 4343873 - 4344268 | 13777.4 |
| predicted lipid carrier protein yhbt, contains scp2 domain | SAMN06295900_11161 | Not Available | Negative | 4344397 - 4344861 | 16869.6 |
| collagenase-like protease, prtc family | SAMN06295900_11162 | Not Available | Negative | 4344880 - 4345767 | 32379.0 |
| putative protease | SAMN06295900_11163 | Not Available | Negative | 4345811 - 4346884 | 39812.2 |
| uncharacterized conserved protein | SAMN06295900_11164 | Not Available | Positive | 4347098 - 4347340 | 9304.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.