Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit f | SAMN06295900_11145 | Not Available | Negative | 4327261 - 4328862 | 56963.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN06295900_11146 | Not Available | Negative | 4328977 - 4329540 | 20615.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_11147 | Not Available | Positive | 4329847 - 4331058 | 42642.2 |
| methyl-accepting chemotaxis protein (mcp) signalling domain-containing protein | SAMN06295900_11148 | Not Available | Negative | 4331090 - 4332121 | 37448.5 |
| hypothetical protein | SAMN06295900_11149 | Not Available | Positive | 4332520 - 4332924 | 14908.7 |
| beta-lactamase class a | SAMN06295900_11150 | Not Available | Positive | 4333062 - 4333976 | 32252.5 |
| hemerythrin hhe cation binding domain-containing protein | SAMN06295900_11151 | Not Available | Positive | 4334070 - 4334669 | 22587.0 |
| nitric oxide reductase, norz apoprotein | SAMN06295900_11152 | Not Available | Positive | 4335007 - 4337322 | 85311.5 |
| metal-sulfur cluster biosynthetic enzyme | SAMN06295900_11153 | Not Available | Positive | 4337394 - 4337732 | 12021.6 |
| hypothetical protein | SAMN06295900_11154 | Not Available | Positive | 4337672 - 4338886 | 42319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.