Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde-activating enzyme | SAMN06295900_11134 | Not Available | Positive | 4314156 - 4314689 | 19338.4 |
| crispr-associated protein, cas2 family | SAMN06295900_11135 | Not Available | Negative | 4317301 - 4317603 | 11222.5 |
| crispr-associated protein, cas1 family | SAMN06295900_11136 | Not Available | Negative | 4317584 - 4318501 | 33411.3 |
| crispr system cascade subunit case | SAMN06295900_11137 | Not Available | Negative | 4318498 - 4319202 | 26076.4 |
| crispr system cascade subunit casd | SAMN06295900_11138 | Not Available | Negative | 4319199 - 4319927 | 27258.9 |
| crispr system cascade subunit casc | SAMN06295900_11139 | Not Available | Negative | 4319932 - 4320984 | 38210.5 |
| crispr-associated protein, cse2 family | SAMN06295900_11140 | Not Available | Negative | 4321005 - 4321592 | 22553.0 |
| crispr-associated protein, cse1 family | SAMN06295900_11141 | Not Available | Negative | 4321573 - 4323156 | 59620.7 |
| crispr-associated endonuclease/helicase cas3 | SAMN06295900_11142 | Not Available | Negative | 4323293 - 4326031 | 100569.0 |
| hypothetical protein | SAMN06295900_11144 | Not Available | Positive | 4327181 - 4327336 | 5316.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.