Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | SAMN06295900_11124 | Not Available | Positive | 4301186 - 4302028 | 28323.0 |
| transcriptional regulator, gntr family | SAMN06295900_11125 | Not Available | Negative | 4302068 - 4303567 | 54560.9 |
| hypothetical protein | SAMN06295900_11126 | Not Available | Positive | 4303756 - 4304124 | 13430.4 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295900_11127 | Not Available | Negative | 4304238 - 4305131 | 32077.8 |
| hypothetical protein | SAMN06295900_11128 | Not Available | Negative | 4305326 - 4305553 | 7821.6 |
| hypothetical protein | SAMN06295900_11129 | Not Available | Positive | 4305860 - 4306033 | 6304.17 |
| two component transcriptional regulator, luxr family | SAMN06295900_11130 | Not Available | Negative | 4306054 - 4306713 | 24270.5 |
| pas domain s-box-containing protein | SAMN06295900_11131 | Not Available | Negative | 4306786 - 4312299 | 200515.0 |
| prc-barrel domain-containing protein | SAMN06295900_11132 | Not Available | Negative | 4312719 - 4313159 | 15495.7 |
| secondary thiamine-phosphate synthase enzyme | SAMN06295900_11133 | Not Available | Positive | 4313507 - 4313926 | 16093.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.