Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11114 | Not Available | Positive | 4291347 - 4292405 | 38441.3 |
| uncharacterized conserved protein | SAMN06295900_11115 | Not Available | Negative | 4292415 - 4292822 | 14602.7 |
| small multidrug resistance family-3 protein | SAMN06295900_11116 | Not Available | Negative | 4292866 - 4293183 | 11338.2 |
| outer membrane protein (porin) | SAMN06295900_11117 | Not Available | Negative | 4293255 - 4294325 | 38332.2 |
| nad(p)h dehydrogenase (quinone) | SAMN06295900_11118 | Not Available | Negative | 4294590 - 4295426 | 30570.0 |
| transcriptional regulator, lysr family | SAMN06295900_11119 | Not Available | Positive | 4295513 - 4296406 | 32874.8 |
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN06295900_11120 | Not Available | Negative | 4296505 - 4298049 | 54480.1 |
| undecaprenyl-diphosphatase | SAMN06295900_11121 | Not Available | Negative | 4298302 - 4299000 | 26095.4 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN06295900_11122 | Not Available | Positive | 4299323 - 4300456 | 40815.7 |
| hypothetical protein | SAMN06295900_11123 | Not Available | Negative | 4300496 - 4300690 | 7102.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.