Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein deda, snare-associated domain | SAMN06295900_1114 | Not Available | Positive | 4281181 - 4282182 | 35373.7 |
| predicted oxidoreductase | SAMN06295900_1115 | Not Available | Negative | 4282208 - 4283260 | 38328.1 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN06295900_1116 | Not Available | Negative | 4283547 - 4285034 | 51729.4 |
| uncharacterized conserved protein, duf305 family | SAMN06295900_1117 | Not Available | Negative | 4285031 - 4285567 | 18903.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295900_1118 | Not Available | Positive | 4285825 - 4286343 | 19507.6 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN06295900_1119 | Not Available | Positive | 4286340 - 4287203 | 30781.5 |
| transcriptional regulator, gntr family | SAMN06295900_11110 | Not Available | Negative | 4287220 - 4287981 | 27656.9 |
| aerobic c4-dicarboxylate transport protein | SAMN06295900_11111 | Not Available | Positive | 4288303 - 4289634 | 46406.1 |
| allantoicase | SAMN06295900_11112 | Not Available | Positive | 4289695 - 4290705 | 36960.8 |
| ureidoglycolate lyase | SAMN06295900_11113 | Not Available | Positive | 4290702 - 4291211 | 18328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.