Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyltransferase | SAMN06295900_110162 | Not Available | Negative | 4268954 - 4270645 | 62339.7 |
| hypothetical protein | SAMN06295900_110163 | Not Available | Negative | 4270642 - 4272030 | 50137.8 |
| glycine hydroxymethyltransferase | SAMN06295900_110164 | Not Available | Negative | 4272027 - 4273400 | 50024.4 |
| aconitase | SAMN06295900_110165 | Not Available | Negative | 4273776 - 4276496 | 98133.8 |
| 2-methylcitrate dehydratase | SAMN06295900_110166 | Not Available | Negative | 4276574 - 4278025 | 53079.1 |
| hypothetical protein | SAMN06295900_110167 | Not Available | Negative | 4278050 - 4278547 | 17606.2 |
| citrate synthase | SAMN06295900_110168 | Not Available | Negative | 4278665 - 4278886 | 8407.28 |
| hypothetical protein | SAMN06295900_1111 | Not Available | Negative | 4278887 - 4278978 | 3341.06 |
| putative oxidoreductase | SAMN06295900_1112 | Not Available | Positive | 4279909 - 4280316 | 14297.1 |
| protein of unknown function | SAMN06295900_1113 | Not Available | Positive | 4280554 - 4280889 | 11308.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.