Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | SAMN06295900_110152 | Not Available | Positive | 4254148 - 4255116 | 33574.3 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_110153 | Not Available | Negative | 4255204 - 4256052 | 31549.4 |
| hypothetical protein | SAMN06295900_110154 | Not Available | Negative | 4256074 - 4261017 | 174630.0 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_110155 | Not Available | Positive | 4261165 - 4262037 | 31962.5 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN06295900_110156 | Not Available | Negative | 4262065 - 4263057 | 36482.0 |
| hypothetical protein | SAMN06295900_110157 | Not Available | Negative | 4263073 - 4263795 | 27476.4 |
| asparagine synthase (glutamine-hydrolysing) | SAMN06295900_110158 | Not Available | Negative | 4263850 - 4265652 | 65742.8 |
| seryl-trna synthetase | SAMN06295900_110159 | Not Available | Negative | 4265761 - 4267041 | 47582.9 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase, plp-dependent acc family | SAMN06295900_110160 | Not Available | Negative | 4267070 - 4268158 | 39117.2 |
| methyltransferase domain-containing protein | SAMN06295900_110161 | Not Available | Negative | 4268155 - 4268922 | 28390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.