Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triacylglycerol lipase | SAMN06295900_110142 | Not Available | Positive | 4239460 - 4240563 | 37559.6 |
| lipase chaperone limk | SAMN06295900_110143 | Not Available | Positive | 4240567 - 4241598 | 36685.4 |
| transcriptional regulator, gntr family | SAMN06295900_110144 | Not Available | Negative | 4241712 - 4243259 | 55939.3 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN06295900_110145 | Not Available | Positive | 4243389 - 4244489 | 40396.7 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN06295900_110146 | Not Available | Positive | 4244570 - 4245619 | 37982.1 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_110147 | Not Available | Positive | 4245771 - 4247039 | 46092.9 |
| putative spermidine/putrescine transport system permease protein | SAMN06295900_110148 | Not Available | Positive | 4247088 - 4247924 | 29872.3 |
| hypothetical protein | SAMN06295900_110149 | Not Available | Negative | 4248011 - 4248325 | 11809.8 |
| rhs repeat-associated core domain-containing protein | SAMN06295900_110150 | Not Available | Negative | 4248322 - 4249203 | 32643.4 |
| yd repeat-containing protein | SAMN06295900_110151 | Not Available | Positive | 4249606 - 4254060 | 160886.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.