Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_110132 | Not Available | Negative | 4222688 - 4223503 | 28763.5 |
| catechol 2,3-dioxygenase | SAMN06295900_110133 | Not Available | Negative | 4223522 - 4223911 | 13923.2 |
| uncharacterized domain 1-containing protein | SAMN06295900_110134 | Not Available | Negative | 4224008 - 4224475 | 16614.9 |
| methyl-accepting chemotaxis sensory transducer with tarh sensor | SAMN06295900_110135 | Not Available | Positive | 4224718 - 4226331 | 56797.1 |
| mannose-6-phosphate isomerase | SAMN06295900_110136 | Not Available | Negative | 4226452 - 4227555 | 39011.0 |
| hypothetical protein | SAMN06295900_110137 | Not Available | Positive | 4227789 - 4228913 | 38410.2 |
| cu+-exporting atpase | SAMN06295900_110138 | Not Available | Negative | 4229052 - 4231322 | 78306.2 |
| uncharacterized conserved protein | SAMN06295900_110139 | Not Available | Positive | 4231816 - 4233270 | 50613.6 |
| uncharacterized protein involved in outer membrane biogenesis | SAMN06295900_110140 | Not Available | Positive | 4233283 - 4237050 | 133171.0 |
| atp-binding cassette, subfamily b | SAMN06295900_110141 | Not Available | Positive | 4237416 - 4239251 | 66246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.