Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mg2+ transporter-c (mgtc) family protein | SAMN06295900_11082 | Not Available | Positive | 4161299 - 4161997 | 24637.8 |
| l-glutamine-binding protein | SAMN06295900_11083 | Not Available | Positive | 4162227 - 4162985 | 27491.0 |
| l-glutamine abc transporter membrane protein | SAMN06295900_11084 | Not Available | Positive | 4163077 - 4163733 | 23186.6 |
| l-glutamine abc transporter atp-binding protein | SAMN06295900_11085 | Not Available | Positive | 4163730 - 4164458 | 26258.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN06295900_11086 | Not Available | Positive | 4164617 - 4165978 | 48657.3 |
| 4-carboxymuconolactone decarboxylase | SAMN06295900_11087 | Not Available | Positive | 4166015 - 4166587 | 21139.2 |
| transcriptional regulator, merr family | SAMN06295900_11088 | Not Available | Negative | 4166657 - 4167526 | 31023.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN06295900_11089 | Not Available | Positive | 4167756 - 4168571 | 29467.8 |
| trehalose 6-phosphate synthase | SAMN06295900_11090 | Not Available | Positive | 4168862 - 4170256 | 52339.0 |
| rubrerythrin | SAMN06295900_11091 | Not Available | Positive | 4170504 - 4170926 | 15286.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.