Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | SAMN06295900_11072 | Not Available | Negative | 4148445 - 4148789 | 12629.6 |
| acyl transferase domain-containing protein | SAMN06295900_11073 | Not Available | Negative | 4148850 - 4152692 | 136513.0 |
| crotonyl-coa carboxylase/reductase | SAMN06295900_11074 | Not Available | Negative | 4152728 - 4153702 | 35076.1 |
| tetratricopeptide (tpr) repeat | SAMN06295900_11075 | Not Available | Positive | 4153707 - 4155530 | 66210.0 |
| hypothetical protein | SAMN06295900_11076 | Not Available | Positive | 4155481 - 4155849 | 12821.9 |
| glycosyltransferase involved in lps biosynthesis, gr25 family | SAMN06295900_11077 | Not Available | Positive | 4155860 - 4156615 | 27983.2 |
| protein of unknown function | SAMN06295900_11078 | Not Available | Positive | 4156679 - 4157365 | 25052.8 |
| hypothetical protein | SAMN06295900_11079 | Not Available | Positive | 4157463 - 4157936 | 17035.8 |
| site-specific dna recombinase | SAMN06295900_11080 | Not Available | Negative | 4158032 - 4158643 | 22464.8 |
| transcriptional regulator, rpir family | SAMN06295900_11081 | Not Available | Positive | 4159865 - 4160725 | 31003.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.