Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_11062 | Not Available | Positive | 4135891 - 4136793 | 33478.3 |
| hypothetical protein | SAMN06295900_11063 | Not Available | Negative | 4136663 - 4137250 | 21663.9 |
| hypothetical protein | SAMN06295900_11064 | Not Available | Negative | 4137291 - 4138199 | 33965.5 |
| beta-alanine--pyruvate transaminase | SAMN06295900_11065 | Not Available | Negative | 4138462 - 4139787 | 46917.1 |
| putative membrane protein | SAMN06295900_11066 | Not Available | Negative | 4140099 - 4141019 | 34279.0 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN06295900_11067 | Not Available | Negative | 4141052 - 4143379 | 85384.6 |
| transcriptional regulator, gntr family | SAMN06295900_11068 | Not Available | Positive | 4143543 - 4145021 | 55274.0 |
| pyruvate kinase | SAMN06295900_11069 | Not Available | Positive | 4145160 - 4146578 | 50634.0 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN06295900_11070 | Not Available | Positive | 4146753 - 4147226 | 17312.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN06295900_11071 | Not Available | Negative | 4147368 - 4148390 | 35893.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.