Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11052 | Not Available | Negative | 4126821 - 4127069 | 9091.65 |
| mfs transporter, putative metabolite:h+ symporter | SAMN06295900_11053 | Not Available | Negative | 4127194 - 4128759 | 56330.9 |
| hypothetical protein | SAMN06295900_11054 | Not Available | Positive | 4128970 - 4129650 | 24430.5 |
| predicted ester cyclase | SAMN06295900_11055 | Not Available | Negative | 4129720 - 4130160 | 16696.2 |
| pard-like antitoxin of type ii toxin-antitoxin system | SAMN06295900_11056 | Not Available | Positive | 4130336 - 4130548 | 7519.07 |
| methionine aminopeptidase, type i | SAMN06295900_11057 | Not Available | Positive | 4130545 - 4131312 | 28273.8 |
| aerobic c4-dicarboxylate transport protein | SAMN06295900_11058 | Not Available | Negative | 4131364 - 4132689 | 46217.0 |
| 3-isopropylmalate dehydratase, small subunit | SAMN06295900_11059 | Not Available | Negative | 4132848 - 4133453 | 22358.9 |
| 3-isopropylmalate dehydratase, large subunit | SAMN06295900_11060 | Not Available | Negative | 4133450 - 4134868 | 50577.2 |
| haloacetate dehalogenase | SAMN06295900_11061 | Not Available | Negative | 4134884 - 4135762 | 32189.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.