Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_11042 | Not Available | Positive | 4118594 - 4118827 | 8626.07 |
| serine o-acetyltransferase | SAMN06295900_11043 | Not Available | Positive | 4118963 - 4119907 | 33754.5 |
| transcriptional regulator, arac family | SAMN06295900_11044 | Not Available | Positive | 4119904 - 4120746 | 30045.0 |
| hypothetical protein | SAMN06295900_11045 | Not Available | Positive | 4121040 - 4122347 | 49633.8 |
| hypothetical protein | SAMN06295900_11046 | Not Available | Positive | 4122311 - 4122766 | 17865.6 |
| transposase domain | SAMN06295900_11047 | Not Available | Positive | 4122843 - 4123628 | 29272.0 |
| hypothetical protein | SAMN06295900_11048 | Not Available | Positive | 4123742 - 4123978 | 8674.01 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN06295900_11049 | Not Available | Positive | 4124128 - 4125060 | 31767.7 |
| gtp cyclohydrolase i | SAMN06295900_11050 | Not Available | Negative | 4125099 - 4125800 | 25736.9 |
| 3-oxoadipate enol-lactonase | SAMN06295900_11051 | Not Available | Positive | 4125966 - 4126757 | 28254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.