Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate racemase | SAMN06295900_11022 | Not Available | Positive | 4092923 - 4094443 | 55050.5 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN06295900_11023 | Not Available | Negative | 4094578 - 4096050 | 52621.6 |
| adenosylcobinamide-phosphate synthase | SAMN06295900_11024 | Not Available | Positive | 4096245 - 4097228 | 34447.6 |
| l-threonine o-3-phosphate decarboxylase | SAMN06295900_11025 | Not Available | Positive | 4097244 - 4098293 | 37391.7 |
| pas domain s-box-containing protein | SAMN06295900_11026 | Not Available | Positive | 4098486 - 4102928 | 162572.0 |
| dna-binding protein h-ns | SAMN06295900_11027 | Not Available | Positive | 4103803 - 4104048 | 9469.05 |
| cob(ii)yrinic acid a,c-diamide reductase | SAMN06295900_11028 | Not Available | Negative | 4104072 - 4104728 | 24885.2 |
| ferritin-like metal-binding protein ycie | SAMN06295900_11029 | Not Available | Negative | 4104885 - 4105394 | 18731.6 |
| hypothetical protein | SAMN06295900_11030 | Not Available | Positive | 4105601 - 4105738 | 5269.06 |
| cytochrome c, mono-and diheme variants | SAMN06295900_11031 | Not Available | Negative | 4105799 - 4107142 | 47983.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.