Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN06295900_109176 | Not Available | Negative | 4057173 - 4058261 | 40012.0 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paad | SAMN06295900_109177 | Not Available | Negative | 4058282 - 4058818 | 19051.8 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paac | SAMN06295900_109178 | Not Available | Negative | 4058862 - 4059665 | 29585.8 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paab | SAMN06295900_109179 | Not Available | Negative | 4059673 - 4059957 | 10700.7 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paaa | SAMN06295900_109180 | Not Available | Negative | 4060002 - 4061000 | 37213.2 |
| transglycosylase slt domain-containing protein | SAMN06295900_109181 | Not Available | Negative | 4061192 - 4061668 | 17153.6 |
| hypothetical protein | SAMN06295900_109182 | Not Available | Negative | 4061699 - 4062190 | 17037.6 |
| hypothetical protein | SAMN06295900_109183 | Not Available | Negative | 4062194 - 4062586 | 13531.3 |
| lysophospholipase l1 | SAMN06295900_109184 | Not Available | Positive | 4062953 - 4064197 | 43666.8 |
| uncharacterized conserved protein, duf2345 family | SAMN06295900_1101 | Not Available | Positive | 4064510 - 4066204 | 59873.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.