Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid-binding protein, pbp family | SAMN06295900_109156 | Not Available | Negative | 4030649 - 4031248 | 21329.3 |
| two component transcriptional regulator, luxr family | SAMN06295900_109157 | Not Available | Positive | 4031457 - 4032209 | 26707.3 |
| orotate phosphoribosyltransferase | SAMN06295900_109158 | Not Available | Negative | 4032327 - 4033013 | 25503.6 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_109159 | Not Available | Negative | 4033199 - 4033507 | 10932.8 |
| hypothetical protein | SAMN06295900_109160 | Not Available | Negative | 4033529 - 4033987 | 17409.2 |
| hypothetical protein | SAMN06295900_109161 | Not Available | Negative | 4034224 - 4034988 | 27798.6 |
| hypothetical protein | SAMN06295900_109162 | Not Available | Negative | 4035277 - 4036368 | 41306.6 |
| hypothetical protein | SAMN06295900_109163 | Not Available | Negative | 4036368 - 4038947 | 93626.7 |
| protein of unknown function | SAMN06295900_109164 | Not Available | Negative | 4038959 - 4039843 | 32649.7 |
| rhs element vgr protein | SAMN06295900_109165 | Not Available | Negative | 4039858 - 4042350 | 90019.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.