Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN06295900_109146 | Not Available | Positive | 4019935 - 4020804 | 29897.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_109147 | Not Available | Positive | 4021007 - 4021660 | 22988.3 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_109148 | Not Available | Negative | 4021852 - 4023171 | 44430.1 |
| transcriptional regulator, lysr family | SAMN06295900_109149 | Not Available | Positive | 4023224 - 4024228 | 35775.5 |
| response regulator receiver domain-containing protein | SAMN06295900_109150 | Not Available | Positive | 4024548 - 4025012 | 16425.8 |
| hypothetical protein | SAMN06295900_109151 | Not Available | Negative | 4025122 - 4025373 | 9564.55 |
| outer membrane protein | SAMN06295900_109152 | Not Available | Negative | 4025387 - 4026223 | 28913.4 |
| protein of unknown function | SAMN06295900_109153 | Not Available | Negative | 4026317 - 4027525 | 41929.3 |
| protein of unknown function | SAMN06295900_109154 | Not Available | Negative | 4027694 - 4029052 | 45037.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN06295900_109155 | Not Available | Negative | 4029567 - 4030577 | 36789.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.