Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein v | SAMN06295900_109116 | Not Available | Positive | 3969980 - 3972277 | 81746.9 |
| type iii secretion protein s | SAMN06295900_109117 | Not Available | Positive | 3972274 - 3972552 | 9566.1 |
| type iii secretion protein c | SAMN06295900_109118 | Not Available | Positive | 3972552 - 3974687 | 75513.7 |
| type iii secretion apparatus protein, yscd/hrpq family | SAMN06295900_109119 | Not Available | Positive | 3974671 - 3976077 | 47869.9 |
| hypothetical protein | SAMN06295900_109120 | Not Available | Positive | 3976236 - 3976436 | 6698.6 |
| hypothetical protein | SAMN06295900_109121 | Not Available | Positive | 3976658 - 3977176 | 18018.2 |
| type iii secretion apparatus lipoprotein, yscj/hrcj family | SAMN06295900_109122 | Not Available | Positive | 3977173 - 3978054 | 31087.6 |
| type iii secretion protein k | SAMN06295900_109123 | Not Available | Positive | 3978086 - 3978781 | 25972.6 |
| type iii secretion protein l | SAMN06295900_109124 | Not Available | Positive | 3978763 - 3979392 | 22960.7 |
| atp synthase in type iii secretion protein n | SAMN06295900_109125 | Not Available | Positive | 3979389 - 3980771 | 49326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.