Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of rnase e activity rraa | SAMN06295900_109106 | Not Available | Negative | 3960384 - 3961082 | 25148.2 |
| pqq-like domain-containing protein | SAMN06295900_109107 | Not Available | Negative | 3961377 - 3962051 | 24144.2 |
| hypothetical protein | SAMN06295900_109108 | Not Available | Negative | 3962061 - 3963281 | 43178.7 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN06295900_109109 | Not Available | Positive | 3963380 - 3964153 | 29229.2 |
| predicted metal-binding membrane protein | SAMN06295900_109110 | Not Available | Positive | 3964302 - 3965012 | 24689.0 |
| methyltransferase domain-containing protein | SAMN06295900_109111 | Not Available | Negative | 3965100 - 3965945 | 30107.7 |
| hypothetical protein | SAMN06295900_109112 | Not Available | Negative | 3966077 - 3967072 | 36542.6 |
| hypothetical protein | SAMN06295900_109113 | Not Available | Positive | 3967121 - 3967552 | 16050.4 |
| transcriptional regulator, luxr family | SAMN06295900_109114 | Not Available | Negative | 3967594 - 3968514 | 34026.6 |
| transcriptional regulator, luxr family | SAMN06295900_109115 | Not Available | Positive | 3968784 - 3969671 | 33234.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.