Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN06295900_10996 | Not Available | Negative | 3951592 - 3952521 | 32169.3 |
| transporter, cpa2 family | SAMN06295900_10997 | Not Available | Negative | 3952736 - 3953992 | 42928.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN06295900_10998 | Not Available | Negative | 3954054 - 3954983 | 33477.2 |
| chlorinating enzyme | SAMN06295900_10999 | Not Available | Negative | 3955018 - 3955899 | 34258.9 |
| phosphopantetheine attachment site | SAMN06295900_109100 | Not Available | Negative | 3955936 - 3956199 | 10018.0 |
| amino acid adenylation domain-containing protein | SAMN06295900_109101 | Not Available | Negative | 3956293 - 3957840 | 56418.1 |
| cupin domain-containing protein | SAMN06295900_109102 | Not Available | Negative | 3957877 - 3958257 | 13609.2 |
| hypothetical protein | SAMN06295900_109103 | Not Available | Negative | 3958259 - 3958927 | 25148.5 |
| branched-chain amino acid aminotransferase | SAMN06295900_109104 | Not Available | Negative | 3958959 - 3959816 | 31287.4 |
| hypothetical protein | SAMN06295900_109105 | Not Available | Negative | 3959813 - 3960352 | 19416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.