Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_10986 | Not Available | Positive | 3941529 - 3942347 | 28236.5 |
| hypothetical protein | SAMN06295900_10987 | Not Available | Positive | 3942344 - 3942613 | 9652.16 |
| hypothetical protein | SAMN06295900_10988 | Not Available | Positive | 3943409 - 3943867 | 17027.8 |
| hypothetical protein | SAMN06295900_10989 | Not Available | Positive | 3944023 - 3944385 | 13256.8 |
| hypothetical protein | SAMN06295900_10990 | Not Available | Positive | 3944646 - 3945239 | 21442.4 |
| hemolysin activation/secretion protein | SAMN06295900_10991 | Not Available | Positive | 3945290 - 3947050 | 63890.3 |
| autotransporter-associated beta strand repeat-containing protein | SAMN06295900_10992 | Not Available | Positive | 3947273 - 3949210 | 66461.6 |
| luxr family transcriptional regulator | SAMN06295900_10993 | Not Available | Negative | 3949427 - 3950140 | 26909.9 |
| ketosteroid isomerase homolog | SAMN06295900_10994 | Not Available | Positive | 3950541 - 3950990 | 17010.2 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN06295900_10995 | Not Available | Negative | 3950987 - 3951541 | 19427.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.