Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine aminotransferase apoenzyme | SAMN06295900_10976 | Not Available | Negative | 3924709 - 3925866 | 40818.6 |
| protein of unknown function | SAMN06295900_10977 | Not Available | Negative | 3925863 - 3926369 | 18706.3 |
| hypothetical protein | SAMN06295900_10978 | Not Available | Negative | 3926378 - 3926473 | 3334.3 |
| pyrroloquinoline quinone biosynthesis protein e | SAMN06295900_10979 | Not Available | Negative | 3926474 - 3927619 | 42861.4 |
| two component transcriptional regulator, luxr family | SAMN06295900_10980 | Not Available | Negative | 3927790 - 3928437 | 22814.0 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN06295900_10981 | Not Available | Negative | 3928434 - 3929852 | 50930.3 |
| pyrroloquinoline quinone biosynthesis protein d | SAMN06295900_10982 | Not Available | Positive | 3930312 - 3930638 | 11772.1 |
| hemerythrin hhe cation binding domain-containing protein | SAMN06295900_10983 | Not Available | Positive | 3930811 - 3931194 | 14442.5 |
| filamentous hemagglutinin | SAMN06295900_10984 | Not Available | Positive | 3931869 - 3941273 | 311044.0 |
| hypothetical protein | SAMN06295900_10985 | Not Available | Positive | 3941278 - 3941526 | 9085.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.