Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative serine esterase | SAMN06295900_10966 | Not Available | Negative | 3899900 - 3901288 | 50181.8 |
| 5-methylcytosine-specific restriction enzyme a | SAMN06295900_10967 | Not Available | Negative | 3901535 - 3902416 | 32199.9 |
| uvrd-like helicase c-terminal domain-containing protein | SAMN06295900_10968 | Not Available | Positive | 3902696 - 3904585 | 70647.2 |
| hypothetical protein | SAMN06295900_10969 | Not Available | Negative | 3904677 - 3905528 | 31483.3 |
| d-mannose binding lectin | SAMN06295900_10970 | Not Available | Negative | 3905683 - 3906708 | 36181.4 |
| aaa atpase domain-containing protein | SAMN06295900_10971 | Not Available | Positive | 3907067 - 3910432 | 122592.0 |
| filamentous hemagglutinin | SAMN06295900_10972 | Not Available | Positive | 3910755 - 3921122 | 343537.0 |
| immunity protein 49 | SAMN06295900_10973 | Not Available | Positive | 3921122 - 3921934 | 30878.9 |
| hemolysin activation/secretion protein | SAMN06295900_10974 | Not Available | Positive | 3922088 - 3923848 | 64005.8 |
| dihydroorotate dehydrogenase | SAMN06295900_10975 | Not Available | Negative | 3923960 - 3924712 | 26030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.