Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN06295900_10956 | Not Available | Negative | 3892727 - 3893371 | 23609.9 |
| rare lipoprotein a | SAMN06295900_10957 | Not Available | Positive | 3894083 - 3894622 | 18995.4 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06295900_10958 | Not Available | Negative | 3894772 - 3895650 | 30912.8 |
| putative endonuclease | SAMN06295900_10959 | Not Available | Positive | 3895688 - 3896233 | 19313.2 |
| phosphoheptose isomerase | SAMN06295900_10960 | Not Available | Positive | 3896346 - 3896933 | 20182.2 |
| osmotically-inducible protein osmy, contains bon domain | SAMN06295900_10961 | Not Available | Positive | 3896958 - 3897746 | 26983.2 |
| cytochrome c | SAMN06295900_10962 | Not Available | Positive | 3897749 - 3898108 | 12206.0 |
| Trna-ala | Not Available | Not Available | Positive | 3898203 - 3898278 | Not Available |
| hypothetical protein | SAMN06295900_10964 | Not Available | Positive | 3898460 - 3899473 | 38234.8 |
| transposase | SAMN06295900_10965 | Not Available | Negative | 3899591 - 3899755 | 5943.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.