Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase lhgo | SAMN06295900_10946 | Not Available | Positive | 3882882 - 3883991 | 38716.4 |
| high potential iron-sulfur protein | SAMN06295900_10947 | Not Available | Positive | 3884175 - 3884486 | 11022.1 |
| carboxymethylenebutenolidase | SAMN06295900_10948 | Not Available | Negative | 3884589 - 3885287 | 24747.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN06295900_10949 | Not Available | Positive | 3885862 - 3887007 | 40216.3 |
| fucose permease | SAMN06295900_10950 | Not Available | Negative | 3887114 - 3888241 | 37878.6 |
| hypothetical protein | SAMN06295900_10951 | Not Available | Positive | 3888494 - 3889153 | 24345.1 |
| dna-binding protein h-ns | SAMN06295900_10952 | Not Available | Positive | 3889602 - 3889901 | 11062.2 |
| cation diffusion facilitator family transporter | SAMN06295900_10953 | Not Available | Positive | 3890219 - 3891436 | 43285.3 |
| transcriptional regulator, asnc family | SAMN06295900_10954 | Not Available | Negative | 3891534 - 3891992 | 17372.0 |
| hypothetical protein | SAMN06295900_10955 | Not Available | Negative | 3892083 - 3892730 | 24050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.