Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_10936 | Not Available | Negative | 3873418 - 3873990 | 19711.8 |
| hypothetical protein | SAMN06295900_10937 | Not Available | Positive | 3874101 - 3874340 | 8943.86 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06295900_10938 | Not Available | Negative | 3874298 - 3875695 | 49016.2 |
| two component transcriptional regulator, luxr family | SAMN06295900_10939 | Not Available | Negative | 3876028 - 3876687 | 24191.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06295900_10940 | Not Available | Negative | 3876691 - 3877539 | 29804.2 |
| ferredoxin--nadp+ reductase | SAMN06295900_10941 | Not Available | Negative | 3878034 - 3878804 | 28894.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_10942 | Not Available | Negative | 3879020 - 3879760 | 25711.6 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06295900_10943 | Not Available | Negative | 3879872 - 3880678 | 30081.2 |
| hypothetical protein | SAMN06295900_10944 | Not Available | Negative | 3880700 - 3881209 | 18054.5 |
| atp-dependent lon protease | SAMN06295900_10945 | Not Available | Positive | 3881511 - 3882497 | 36020.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.