Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar flij protein | SAMN06295900_10926 | Not Available | Negative | 3864064 - 3864516 | 16846.9 |
| flagellum-specific atp synthase | SAMN06295900_10927 | Not Available | Negative | 3864532 - 3866163 | 57566.6 |
| flagellar assembly protein flih | SAMN06295900_10928 | Not Available | Negative | 3866157 - 3866825 | 23563.7 |
| flagellar motor switch protein flig | SAMN06295900_10929 | Not Available | Negative | 3866818 - 3867813 | 36492.0 |
| flagellar m-ring protein flif | SAMN06295900_10930 | Not Available | Negative | 3867803 - 3869641 | 64273.3 |
| flagellar hook-basal body complex protein flie | SAMN06295900_10931 | Not Available | Positive | 3869897 - 3870238 | 11624.9 |
| flagellar protein flis | SAMN06295900_10932 | Not Available | Positive | 3870476 - 3870910 | 15309.5 |
| flagellar protein flit | SAMN06295900_10933 | Not Available | Positive | 3870907 - 3871236 | 12435.9 |
| hook-length control protein flik | SAMN06295900_10934 | Not Available | Positive | 3871329 - 3872861 | 50589.9 |
| type iii secretion system substrate exporter, flhb-like | SAMN06295900_10935 | Not Available | Positive | 3872858 - 3873274 | 14154.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.