Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein 1 flgk | SAMN06295900_10916 | Not Available | Positive | 3854135 - 3856063 | 65000.0 |
| flagellar hook-associated protein 3 flgl | SAMN06295900_10917 | Not Available | Positive | 3856077 - 3857306 | 42274.9 |
| flagellar biosynthetic protein flir | SAMN06295900_10918 | Not Available | Negative | 3857455 - 3858237 | 27250.3 |
| flagellar biosynthetic protein fliq | SAMN06295900_10919 | Not Available | Negative | 3858282 - 3858551 | 9547.13 |
| flagellar biosynthetic protein flip | SAMN06295900_10920 | Not Available | Negative | 3858575 - 3859354 | 28027.5 |
| flagellar protein flio/fliz | SAMN06295900_10921 | Not Available | Negative | 3859355 - 3859951 | 19875.1 |
| flagellar motor switch protein flin/fliy | SAMN06295900_10922 | Not Available | Negative | 3859948 - 3860430 | 16763.0 |
| flagellar motor switch protein flim | SAMN06295900_10923 | Not Available | Negative | 3860423 - 3861424 | 37543.3 |
| flagellar flil protein | SAMN06295900_10924 | Not Available | Negative | 3861527 - 3862021 | 17814.8 |
| flagellar hook-length control protein flik | SAMN06295900_10925 | Not Available | Negative | 3862438 - 3863952 | 48573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.