Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgb | SAMN06295900_1096 | Not Available | Positive | 3845018 - 3845530 | 17739.7 |
| flagellar basal-body rod protein flgc | SAMN06295900_1097 | Not Available | Positive | 3845591 - 3846013 | 14659.3 |
| flagellar basal-body rod modification protein flgd | SAMN06295900_1098 | Not Available | Positive | 3846025 - 3846735 | 23438.1 |
| flagellar hook protein flge | SAMN06295900_1099 | Not Available | Positive | 3846772 - 3848013 | 42334.6 |
| flagellar basal-body rod protein flgf | SAMN06295900_10910 | Not Available | Positive | 3848052 - 3848810 | 25895.2 |
| flagellar basal-body rod protein flgg | SAMN06295900_10911 | Not Available | Positive | 3848861 - 3849649 | 27573.3 |
| flagellar l-ring protein precursor flgh | SAMN06295900_10912 | Not Available | Positive | 3849691 - 3850416 | 25435.3 |
| flagellar p-ring protein precursor flgi | SAMN06295900_10913 | Not Available | Positive | 3850419 - 3851585 | 39954.5 |
| flagellar protein flgj | SAMN06295900_10914 | Not Available | Positive | 3851622 - 3852638 | 35034.3 |
| c-di-gmp-binding flagellar brake protein ycgr, contains pilznr and pilz domains | SAMN06295900_10915 | Not Available | Positive | 3853103 - 3853858 | 28042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.