Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN06295900_108213 | Not Available | Positive | 3837375 - 3837686 | 11618.7 |
| dna topoisomerase-1 | SAMN06295900_108214 | Not Available | Positive | 3837757 - 3838902 | 42376.9 |
| hypothetical protein | SAMN06295900_108215 | Not Available | Positive | 3839095 - 3839448 | 12418.7 |
| hypothetical protein | SAMN06295900_108216 | Not Available | Positive | 3839700 - 3839954 | 9451.99 |
| phage integrase family protein | SAMN06295900_108217 | Not Available | Positive | 3840076 - 3840702 | 23911.0 |
| glyoxylase i family protein | SAMN06295900_1091 | Not Available | Positive | 3841219 - 3841620 | 14957.5 |
| nicotinamidase-related amidase | SAMN06295900_1092 | Not Available | Positive | 3841617 - 3842183 | 20740.5 |
| flagella synthesis protein flgn | SAMN06295900_1093 | Not Available | Negative | 3842419 - 3842859 | 15743.1 |
| anti-sigma-28 factor, flgm family | SAMN06295900_1094 | Not Available | Negative | 3842954 - 3843304 | 11336.1 |
| flagella basal body p-ring formation protein flga | SAMN06295900_1095 | Not Available | Negative | 3843473 - 3844756 | 42453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.